Oxford University Press Bioinformatics Prize (2001-2005)

Conference: GIW2001
Authors: Katsuhisa Horimoto, Hiroyuki Toh
Title: ASIAN: Automatic System for Inferring a Network for Gene Expression Profiles

Conference: GIW2002
Authors: Akinori Sarai, Samuel Selvaraj, Michael M. Gromiha, Joerg-Gerald Siebers, Ponraj Prabakaran, Hidetoshi Kono
Title: Target Prediction of Transcription Factors: Application of Structure-based Method to Yeast Genome

Conference: GIW2003
Authors: Masafumi Ohtsubo, Susumu Mitsuyama, Takashi Kawamura, Nobuyoshi Shimizu, Shinsei Minoshima
Title: MutationView: An Integrated Knowledge Base for Mutations and Polymorphisms in Human Disease Genes - Automatical Extraction of Disease-Associated Knowledge -

Conference: GIW2004
Authors: Tomoshiro Ochiai, Jose C. Nacher, Tatsuya Akutsu
Title: Markov Property and Scale-free Organization of Gene Expression

Conference: GIW2005
Authors: Hung Dinh Nguyen, Maki Yoshihama, Naoya Kenmochi
Title: A Maximum Likelihood Method for Inference of Spliceosomal Intron Evolution

Oxford Journals - Japanese Society for Bioinformatics Prize (2006-)

Conference: GIW2006
Authors: Yuka Watanabe, Nozomu Yachie, Masaru Tomita, Akio Kanai
Title: Computational Prediction of Drosophila MircoRNA Targets and Analysis of their Negative Feedback Control

Conference: JSBi2007
Authors: Osamu Gotoh
Title: A Space-Efficient and Accurate Method for Mapping and Aligning cDNA or Protein Sequences onto Genomic Sequence

Conference: JSBi2008
Authors: Kengo Sato, Michiaki Hamada, Toutai Mituyama, Kiyoshi Asai, Yasushi Sakakibara
Title: A Non-Parametric Bayesian Approach for Predicting RNA Secondary Structures

Conference: GIW2009/JSBi2009
Authors: Unyanee Poolsap, Yuki Kato, Tatsuya Akutsu
Title: Dynamic Programming Algorithms for RNA Structure Prediction with Binding Sites

Conference: JSBi2010
Authors: Teppei Shimamura, Seiya Imoto, Atsushi Niida, Masao Nagasaki, Rui Yamaguchi, Satoru Miyano
Title: Modulator-Dependent System Changes Unravel Cancer Heterogeneity

Conference: JSBi 2011
Authors: Ryuzo Azuma, Takuo Yasunaga
Title: Iterative Method for 3D Reconstruction of Ultrastructures in Cryo-electron Microscopy